Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0137 | CC_3322 | CC_0137 | CC_3322 | ampG protein, putative; Identified by match to protein family HMM. | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | 0.402 |
| CC_1546 | CC_3322 | CC_1546 | CC_3322 | Penicillin-binding protein 2; Identified by match to protein family HMM. | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | 0.409 |
| CC_1546 | dipM | CC_1546 | CC_1996 | Penicillin-binding protein 2; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.601 |
| CC_1546 | rlpA | CC_1546 | CC_1825 | Penicillin-binding protein 2; Identified by match to protein family HMM. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.539 |
| CC_1876 | CC_3232 | CC_1876 | CC_3232 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | ExbD/TolR family protein; Similar to PID:1103861 SP:P50599; identified by sequence similarity; putative. | 0.759 |
| CC_1876 | CC_3322 | CC_1876 | CC_3322 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | 0.481 |
| CC_1876 | dipM | CC_1876 | CC_1996 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.831 |
| CC_3232 | CC_1876 | CC_3232 | CC_1876 | ExbD/TolR family protein; Similar to PID:1103861 SP:P50599; identified by sequence similarity; putative. | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | 0.759 |
| CC_3232 | CC_3322 | CC_3232 | CC_3322 | ExbD/TolR family protein; Similar to PID:1103861 SP:P50599; identified by sequence similarity; putative. | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | 0.431 |
| CC_3232 | dipM | CC_3232 | CC_1996 | ExbD/TolR family protein; Similar to PID:1103861 SP:P50599; identified by sequence similarity; putative. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.609 |
| CC_3320 | CC_3322 | CC_3320 | CC_3322 | Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702. | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | 0.500 |
| CC_3320 | rpmJ | CC_3320 | CC_3321 | Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702. | Ribosomal protein L36; Identified by match to protein family HMM; Belongs to the bacterial ribosomal protein bL36 family. | 0.831 |
| CC_3322 | CC_0137 | CC_3322 | CC_0137 | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | ampG protein, putative; Identified by match to protein family HMM. | 0.402 |
| CC_3322 | CC_1546 | CC_3322 | CC_1546 | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | Penicillin-binding protein 2; Identified by match to protein family HMM. | 0.409 |
| CC_3322 | CC_1876 | CC_3322 | CC_1876 | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | 0.481 |
| CC_3322 | CC_3232 | CC_3322 | CC_3232 | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | ExbD/TolR family protein; Similar to PID:1103861 SP:P50599; identified by sequence similarity; putative. | 0.431 |
| CC_3322 | CC_3320 | CC_3322 | CC_3320 | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702. | 0.500 |
| CC_3322 | dipM | CC_3322 | CC_1996 | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.654 |
| CC_3322 | rlpA | CC_3322 | CC_1825 | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.428 |
| CC_3322 | rpmJ | CC_3322 | CC_3321 | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | Ribosomal protein L36; Identified by match to protein family HMM; Belongs to the bacterial ribosomal protein bL36 family. | 0.520 |
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