STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3323Conserved hypothetical protein; Identified by Glimmer2; putative. (281 aa)    
Predicted Functional Partners:
CC_0967
Oxidoreductase, Gfo/Idh/MocA family; Identified by match to protein family HMM.
  
 
 0.908
glk
Glucokinase; Identified by match to TIGR protein family HMM TIGR00749; Belongs to the bacterial glucokinase family.
    
 0.907
CC_3167
Identified by match to protein family HMM; Belongs to the bacterial glucokinase family.
    
 0.906
CC_1418
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
     
  0.900
CC_3324
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.538
CC_0823
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.469
CC_0448
PTS system, fructose-specific EIIA/HPr/EI components; Identified by match to protein family HMM.
  
  
 0.452
CC_0537
PTS system, fructose-specific EIIA/HPr/EI components; Identified by match to protein family HMM.
  
  
 0.431
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
 
     0.414
CC_3617
Mannose-6-phosphate isomerase; Similar to GB:M96584 SP:P29954 PID:152407; identified by sequence similarity; putative.
 
  
 0.400
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.