CC_3372 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

CC_3372

ABC-2 type transporter, putative; Identified by match to protein family HMM. (253 aa)

Predicted Functional Partners:

CC_3373

0.973

CC_0188

0.857

CC_3375

0.533

CC_3374

0.523

CC_1147

0.515

CC_2653

0.470

CC_0061

0.461

CC_0324

0.461

CC_1449

0.461

CC_2244

0.457

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0061	CC_2244	Identified by match to PFAM protein family HMM PF00881.	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	0.470
CC_0061	CC_3372	Identified by match to PFAM protein family HMM PF00881.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.461
CC_0188	CC_2244	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	0.865
CC_0188	CC_3372	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.857
CC_0324	CC_2244	NADH dehydrogenase; Identified by match to PFAM protein family HMM PF00881.	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	0.467
CC_0324	CC_3372	NADH dehydrogenase; Identified by match to PFAM protein family HMM PF00881.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.461
CC_1147	CC_2244	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	0.578
CC_1147	CC_3372	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.515
CC_1449	CC_2244	Identified by match to PFAM protein family HMM PF00881.	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	0.461
CC_1449	CC_3372	Identified by match to PFAM protein family HMM PF00881.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.461
CC_2244	CC_0061	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	Identified by match to PFAM protein family HMM PF00881.	0.470
CC_2244	CC_0188	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.865
CC_2244	CC_0324	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	NADH dehydrogenase; Identified by match to PFAM protein family HMM PF00881.	0.467
CC_2244	CC_1147	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.578
CC_2244	CC_1449	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	Identified by match to PFAM protein family HMM PF00881.	0.461
CC_2244	CC_2653	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	Identified by match to PFAM protein family HMM PF00881.	0.492
CC_2244	CC_3372	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.457
CC_2244	CC_3373	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.863
CC_2653	CC_2244	Identified by match to PFAM protein family HMM PF00881.	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	0.492
CC_2653	CC_3372	Identified by match to PFAM protein family HMM PF00881.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.470