CC_3373 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Experiments

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[Homology]

Score

CC_3373

ABC transporter, ATP-binding protein; Identified by match to protein family HMM. (314 aa)

Predicted Functional Partners:

CC_3372

0.973

CC_2244

0.863

CC_1519

0.757

CC_2319

0.601

CC_3374

0.534

CC_3375

0.531

CC_3274

0.487

CC_3420

0.483

CC_0305

0.481

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0305	CC_3373	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.481
CC_1519	CC_3373	Hypothetical protein; Identified by Glimmer2; putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.757
CC_2244	CC_3372	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.457
CC_2244	CC_3373	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.863
CC_2319	CC_3373	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.601
CC_3274	CC_3373	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.487
CC_3372	CC_2244	ABC-2 type transporter, putative; Identified by match to protein family HMM.	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	0.457
CC_3372	CC_3373	ABC-2 type transporter, putative; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.973
CC_3372	CC_3374	ABC-2 type transporter, putative; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.523
CC_3372	CC_3375	ABC-2 type transporter, putative; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.533
CC_3373	CC_0305	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.481
CC_3373	CC_1519	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.757
CC_3373	CC_2244	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061.	0.863
CC_3373	CC_2319	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.601
CC_3373	CC_3274	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.487
CC_3373	CC_3372	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.973
CC_3373	CC_3374	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.534
CC_3373	CC_3375	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.531
CC_3373	CC_3420	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.483
CC_3374	CC_3372	Conserved hypothetical protein; Identified by Glimmer2; putative.	ABC-2 type transporter, putative; Identified by match to protein family HMM.	0.523