STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3374Conserved hypothetical protein; Identified by Glimmer2; putative. (154 aa)    
Predicted Functional Partners:
CC_3375
Identified by match to protein family HMM.
 
  
 0.964
CC_3376
Hypothetical protein; Identified by Glimmer2; putative.
       0.563
CC_3373
ABC transporter, ATP-binding protein; Identified by match to protein family HMM.
  
    0.534
CC_3441
Identified by match to protein family HMM.
   
  
 0.529
CC_3372
ABC-2 type transporter, putative; Identified by match to protein family HMM.
       0.523
coq7
Coq7 family protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
      
 0.518
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
      
 0.514
CC_2207
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.514
CC_2071
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.470
CC_2111
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
    0.468
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.