STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3383Conserved hypothetical protein; Identified by Glimmer2; putative. (353 aa)    
Predicted Functional Partners:
CC_3384
D-beta-hydroxybutyrate dehydrogenase; Identified by match to protein family HMM; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   0.820
CC_3382
Identified by match to protein family HMM; Belongs to the Nudix hydrolase family.
  
    0.781
CC_1380
Poly-beta-hydroxybutyrate polymerase; Identified by match to protein family HMM.
 
  
 0.735
CC_0509
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.567
CC_3381
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.518
CC_0250
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.513
CC_3385
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0246 family.
       0.454
ahpD
Alkyl hydroperoxide reductase D; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
    0.420
CC_3380
2-deoxy-D-gluconate 3-dehydrogenase; Identified by match to protein family HMM.
   
   0.416
CC_0511
acetoacetyl-CoA reductase; Identified by match to protein family HMM; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.404
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.