Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_1532 | CC_3466 | CC_1532 | CC_3466 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.730 |
| CC_1532 | CC_3474 | CC_1532 | CC_3474 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Sensor histidine kinase, putative; Identified by match to protein family HMM. | 0.739 |
| CC_1532 | CC_3475 | CC_1532 | CC_3475 | Conserved hypothetical protein; Identified by Glimmer2; putative. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.739 |
| CC_1532 | CC_3477 | CC_1532 | CC_3477 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Response regulator; Identified by match to protein family HMM. | 0.568 |
| CC_1683 | CC_3058 | CC_1683 | CC_3058 | Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative. | Response regulator/sensor histidine kinase; Identified by match to protein family HMM. | 0.502 |
| CC_1683 | CC_3474 | CC_1683 | CC_3474 | Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative. | Sensor histidine kinase, putative; Identified by match to protein family HMM. | 0.761 |
| CC_1683 | CC_3475 | CC_1683 | CC_3475 | Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.672 |
| CC_1683 | CC_3477 | CC_1683 | CC_3477 | Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative. | Response regulator; Identified by match to protein family HMM. | 0.795 |
| CC_1683 | lovR | CC_1683 | CC_0284 | Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative. | Response regulator LovR; Identified by match to protein family HMM. | 0.766 |
| CC_2554 | CC_2909 | CC_2554 | CC_2909 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | Sensor histidine kinase, putative; Identified by match to protein family HMM. | 0.437 |
| CC_2554 | CC_3058 | CC_2554 | CC_3058 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | Response regulator/sensor histidine kinase; Identified by match to protein family HMM. | 0.648 |
| CC_2554 | CC_3474 | CC_2554 | CC_3474 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | Sensor histidine kinase, putative; Identified by match to protein family HMM. | 0.767 |
| CC_2554 | CC_3475 | CC_2554 | CC_3475 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.686 |
| CC_2554 | CC_3477 | CC_2554 | CC_3477 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | Response regulator; Identified by match to protein family HMM. | 0.843 |
| CC_2554 | lovR | CC_2554 | CC_0284 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | Response regulator LovR; Identified by match to protein family HMM. | 0.786 |
| CC_2909 | CC_2554 | CC_2909 | CC_2554 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | Sensor histidine kinase, putative; Identified by match to protein family HMM. | 0.437 |
| CC_2909 | CC_3058 | CC_2909 | CC_3058 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | Response regulator/sensor histidine kinase; Identified by match to protein family HMM. | 0.524 |
| CC_2909 | CC_3474 | CC_2909 | CC_3474 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | Sensor histidine kinase, putative; Identified by match to protein family HMM. | 0.741 |
| CC_2909 | CC_3475 | CC_2909 | CC_3475 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.637 |
| CC_2909 | CC_3477 | CC_2909 | CC_3477 | Sensor histidine kinase, putative; Identified by match to protein family HMM. | Response regulator; Identified by match to protein family HMM. | 0.793 |
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