Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_1773 | CC_2210 | CC_1773 | CC_2210 | Ubiquinol oxidase subunit II; Similar to PID:673470 PID:673471; identified by sequence similarity; putative. | Thiol:disulfide interchange protein, putative; Identified by match to protein family HMM. | 0.424 |
| CC_1773 | CC_3502 | CC_1773 | CC_3502 | Ubiquinol oxidase subunit II; Similar to PID:673470 PID:673471; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.765 |
| CC_1773 | CC_3503 | CC_1773 | CC_3503 | Ubiquinol oxidase subunit II; Similar to PID:673470 PID:673471; identified by sequence similarity; putative. | SCO1/2 family protein; Similar to SP:P23833 PID:536256 PID:666104; identified by sequence similarity; putative. | 0.749 |
| CC_1773 | CC_3674 | CC_1773 | CC_3674 | Ubiquinol oxidase subunit II; Similar to PID:673470 PID:673471; identified by sequence similarity; putative. | Thiol:disulfide interchange protein CycY; Identified by match to protein family HMM. | 0.434 |
| CC_1773 | ctaB | CC_1773 | CC_3405 | Ubiquinol oxidase subunit II; Similar to PID:673470 PID:673471; identified by sequence similarity; putative. | Protoheme IX farnesyl transferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.885 |
| CC_1773 | ctaG | CC_1773 | CC_3403 | Ubiquinol oxidase subunit II; Similar to PID:673470 PID:673471; identified by sequence similarity; putative. | Cytochrome c oxidase assembly protein, putative; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.666 |
| CC_2210 | CC_1773 | CC_2210 | CC_1773 | Thiol:disulfide interchange protein, putative; Identified by match to protein family HMM. | Ubiquinol oxidase subunit II; Similar to PID:673470 PID:673471; identified by sequence similarity; putative. | 0.424 |
| CC_2210 | CC_3407 | CC_2210 | CC_3407 | Thiol:disulfide interchange protein, putative; Identified by match to protein family HMM. | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.776 |
| CC_2210 | CC_3502 | CC_2210 | CC_3502 | Thiol:disulfide interchange protein, putative; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.400 |
| CC_2210 | CC_3503 | CC_2210 | CC_3503 | Thiol:disulfide interchange protein, putative; Identified by match to protein family HMM. | SCO1/2 family protein; Similar to SP:P23833 PID:536256 PID:666104; identified by sequence similarity; putative. | 0.842 |
| CC_2210 | CC_3674 | CC_2210 | CC_3674 | Thiol:disulfide interchange protein, putative; Identified by match to protein family HMM. | Thiol:disulfide interchange protein CycY; Identified by match to protein family HMM. | 0.650 |
| CC_3407 | CC_2210 | CC_3407 | CC_2210 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Thiol:disulfide interchange protein, putative; Identified by match to protein family HMM. | 0.776 |
| CC_3407 | CC_3502 | CC_3407 | CC_3502 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.762 |
| CC_3407 | CC_3503 | CC_3407 | CC_3503 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | SCO1/2 family protein; Similar to SP:P23833 PID:536256 PID:666104; identified by sequence similarity; putative. | 0.788 |
| CC_3407 | CC_3674 | CC_3407 | CC_3674 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Thiol:disulfide interchange protein CycY; Identified by match to protein family HMM. | 0.431 |
| CC_3407 | ctaA | CC_3407 | CC_1374 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase assembly protein, putative; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.597 |
| CC_3407 | ctaB | CC_3407 | CC_3405 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Protoheme IX farnesyl transferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.987 |
| CC_3407 | ctaG | CC_3407 | CC_3403 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase assembly protein, putative; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.993 |
| CC_3500 | CC_3501 | CC_3500 | CC_3501 | TonB-dependent receptor; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.659 |
| CC_3500 | CC_3502 | CC_3500 | CC_3502 | TonB-dependent receptor; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.611 |
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