STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3560Response regulator/sensor histidine kinase; Identified by match to protein family HMM. (612 aa)    
Predicted Functional Partners:
CC_0598
Chemotaxis protein methyltransferase CheR; Identified by match to protein family HMM.
 
  
 0.869
lovK
LOV histidine kinase LovK; Identified by match to protein family HMM.
  
0.858
CC_3477
Response regulator; Identified by match to protein family HMM.
 
 
 0.841
CC_0435
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
  
 0.799
CC_3561
Aminoglycoside acetyltransferase (6') type I; Catalyzes the transfer of an acetyl group from acetyl-CoA to the 6'-amino group of aminoglycoside molecules conferring resistance to antibiotics containing the purpurosamine ring.
  
    0.775
CC_0248
Sensor histidine kinase; Identified by match to protein family HMM.
   
 
 0.769
CC_3474
Sensor histidine kinase, putative; Identified by match to protein family HMM.
  
     0.742
CC_3198
Sensor histidine kinase; Identified by match to protein family HMM.
 
     0.715
CC_2670
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 
 0.714
CC_2971
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
 
 0.710
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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