STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3561Aminoglycoside acetyltransferase (6') type I; Catalyzes the transfer of an acetyl group from acetyl-CoA to the 6'-amino group of aminoglycoside molecules conferring resistance to antibiotics containing the purpurosamine ring. (147 aa)    
Predicted Functional Partners:
CC_3560
Response regulator/sensor histidine kinase; Identified by match to protein family HMM.
  
    0.775
CC_1761
IS30 family, transposase; Identified by match to protein family HMM.
      
 0.627
CC_2785
Bleomycin resistance protein; Identified by match to PFAM protein family HMM PF02105.
      
 0.627
CC_3224
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
      
 0.627
CC_2392
Transcriptional regulator, GntR family; Identified by match to protein family HMM.
   
  
 0.554
CC_2405
3-oxoadipate CoA-transferase, alpha subunit; Identified by match to PFAM protein family HMM PF01144.
  
  
 0.543
CC_2411
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM.
     
 0.542
CC_2393
Vanillate O-demethylase oxygenase, subunit A; Identified by match to protein family HMM.
   
  
 0.526
CC_2394
Vanillate O-demethylase, reductase subunit; Identified by match to protein family HMM.
      
 0.518
CC_3558
Hypothetical protein; Identified by Glimmer2; putative.
       0.515
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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