STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3569Carbonic anhydrase family protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (222 aa)    
Predicted Functional Partners:
CC_3572
Carbonic anhydrase; Identified by match to protein family HMM.
  
  
 
0.925
CC_3568
Identified by match to protein family HMM.
  
    0.789
CC_3198
Sensor histidine kinase; Identified by match to protein family HMM.
      
 0.731
CC_2643
Identified by match to protein family HMM.
    
 
 0.727
CC_3567
Identified by match to PFAM protein family HMM PF01557.
  
    0.661
CC_3048
Sensor histidine kinase, putative; Identified by match to protein family HMM.
   
  
 0.568
CC_0629
Sensor histidine kinase, putative; Identified by match to protein family HMM.
     
 0.567
CC_0836
Sensor histidine kinase, putative; Identified by match to protein family HMM.
   
  
 0.567
CC_3058
Response regulator/sensor histidine kinase; Identified by match to protein family HMM.
   
  
 0.567
CC_3170
Sensor histidine kinase, putative; Identified by match to protein family HMM.
   
  
 0.567
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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