STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3571Conserved hypothetical protein; Identified by Glimmer2; putative. (1686 aa)    
Predicted Functional Partners:
CC_3570
Penicillin-binding protein, 1A family; Identified by match to protein family HMM.
   
 0.926
CC_3572
Carbonic anhydrase; Identified by match to protein family HMM.
       0.568
CC_1303
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.543
CC_3573
Transcriptional regulator, AsnC family; Identified by match to protein family HMM.
       0.537
CC_0568
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.481
CC_0569
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.475
CC_0567
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.466
hfsH
HfsH; Identified by match to PFAM protein family HMM PF01522.
  
    0.427
CC_0296
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.422
CC_0636
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.422
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.