Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CC_0804 | CC_3573 | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | 0.427 |
| CC_0804 | CC_3574 | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Alanine dehydrogenase; Identified by match to TIGR protein family HMM TIGR00518; Belongs to the AlaDH/PNT family. | 0.545 |
| CC_0804 | CC_3607 | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | 0.947 |
| CC_3571 | CC_3572 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Carbonic anhydrase; Identified by match to protein family HMM. | 0.570 |
| CC_3571 | CC_3573 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | 0.537 |
| CC_3572 | CC_3571 | Carbonic anhydrase; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.570 |
| CC_3572 | CC_3573 | Carbonic anhydrase; Identified by match to protein family HMM. | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | 0.727 |
| CC_3572 | CC_3574 | Carbonic anhydrase; Identified by match to protein family HMM. | Alanine dehydrogenase; Identified by match to TIGR protein family HMM TIGR00518; Belongs to the AlaDH/PNT family. | 0.509 |
| CC_3573 | CC_0804 | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.427 |
| CC_3573 | CC_3571 | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.537 |
| CC_3573 | CC_3572 | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | Carbonic anhydrase; Identified by match to protein family HMM. | 0.727 |
| CC_3573 | CC_3574 | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | Alanine dehydrogenase; Identified by match to TIGR protein family HMM TIGR00518; Belongs to the AlaDH/PNT family. | 0.590 |
| CC_3573 | CC_3607 | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | 0.476 |
| CC_3574 | CC_0804 | Alanine dehydrogenase; Identified by match to TIGR protein family HMM TIGR00518; Belongs to the AlaDH/PNT family. | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.545 |
| CC_3574 | CC_3572 | Alanine dehydrogenase; Identified by match to TIGR protein family HMM TIGR00518; Belongs to the AlaDH/PNT family. | Carbonic anhydrase; Identified by match to protein family HMM. | 0.509 |
| CC_3574 | CC_3573 | Alanine dehydrogenase; Identified by match to TIGR protein family HMM TIGR00518; Belongs to the AlaDH/PNT family. | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | 0.590 |
| CC_3607 | CC_0804 | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.947 |
| CC_3607 | CC_3573 | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | Transcriptional regulator, AsnC family; Identified by match to protein family HMM. | 0.476 |