STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpfRibosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (208 aa)    
Predicted Functional Partners:
rpmC
Ribosomal protein L29; Identified by match to TIGR protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family.
  
 
 
 0.960
rpsU
Ribosomal protein S21; Identified by match to TIGR protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.
 
 
 
 0.959
rpsI
Ribosomal protein S9; Identified by match to protein family HMM; Belongs to the universal ribosomal protein uS9 family.
 
 
 
 0.956
rpmA
Ribosomal protein L27; Identified by match to TIGR protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.
   
 
 0.948
rpmH
Ribosomal protein L34; Identified by match to protein family HMM; Belongs to the bacterial ribosomal protein bL34 family.
   
 
 0.948
rpmI
Ribosomal protein L35; Identified by match to TIGR protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.
 
 
   0.948
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
  
   0.945
rpsE
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.944
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.944
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
 
 0.944
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.