Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CC_0493 | CC_3010 | CC_0493 | CC_3010 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM. | 0.765 |
CC_0493 | CC_3537 | CC_0493 | CC_3537 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.710 |
CC_0493 | CC_3621 | CC_0493 | CC_3621 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.596 |
CC_0493 | CC_3741 | CC_0493 | CC_3741 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.727 |
CC_3010 | CC_0493 | CC_3010 | CC_0493 | Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.765 |
CC_3010 | CC_3537 | CC_3010 | CC_3537 | Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.762 |
CC_3010 | CC_3621 | CC_3010 | CC_3621 | Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.483 |
CC_3010 | CC_3741 | CC_3010 | CC_3741 | Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.612 |
CC_3537 | CC_0493 | CC_3537 | CC_0493 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.710 |
CC_3537 | CC_3010 | CC_3537 | CC_3010 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM. | 0.762 |
CC_3537 | CC_3621 | CC_3537 | CC_3621 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.670 |
CC_3537 | CC_3741 | CC_3537 | CC_3741 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.728 |
CC_3621 | CC_0493 | CC_3621 | CC_0493 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.596 |
CC_3621 | CC_3010 | CC_3621 | CC_3010 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM. | 0.483 |
CC_3621 | CC_3537 | CC_3621 | CC_3537 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.670 |
CC_3621 | CC_3622 | CC_3621 | CC_3622 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0235 family. | 0.861 |
CC_3621 | CC_3623 | CC_3621 | CC_3623 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Sensor histidine kinase/response regulator; Identified by match to protein family HMM. | 0.467 |
CC_3621 | CC_3741 | CC_3621 | CC_3741 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.501 |
CC_3621 | CC_3745 | CC_3621 | CC_3745 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.654 |
CC_3621 | ftsA | CC_3621 | CC_2541 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.489 |
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