STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3689Hypothetical protein; Identified by Glimmer2; putative. (361 aa)    
Predicted Functional Partners:
hfsH
HfsH; Identified by match to PFAM protein family HMM PF01522.
 
  
 0.784
CC_0948
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.659
hfsF
HfsF; Identified by match to protein family HMM.
 
    0.657
hfaB
hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.
  
   
 0.653
hfsC
HfsC; Identified by Glimmer2; putative.
 
   
 0.637
hfsA
HfsA; Identified by Glimmer2; putative.
 
     0.630
hfsG
Identified by match to protein family HMM.
 
     0.621
hfsI
HfsI; Identified by Glimmer2; putative.
 
   
 0.588
CC_2277
Identified by match to protein family HMM.
 
    0.566
CC_2276
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.544
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.