STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3695ABC transporter, permease protein, putative; Identified by match to protein family HMM. (269 aa)    
Predicted Functional Partners:
CC_3694
ABC transporter, substrate-binding protein, putative; Similar to GP:4336800; identified by sequence similarity; putative.
 
 0.998
CC_3696
ABC transporter, ATP-binding protein; Identified by match to protein family HMM.
 0.998
CC_2319
ABC transporter, ATP-binding protein; Identified by match to protein family HMM.
 0.990
CC_3693
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.981
CC_2320
ABC transporter, periplasmic substrate-binding protein, putative; Similar to GP:6969065; identified by sequence similarity; putative.
  
 0.956
CC_2318
ABC transporter, permease protein, putative; Identified by match to protein family HMM.
  
  
 
0.919
CC_3692
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.874
CC_0431
CheX protein; Similar to GP:3282790; identified by sequence similarity; putative.
   
   0.773
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
 
      0.636
CC_3600
ABC transporter, ATP-binding protein; Identified by match to protein family HMM.
  
  0.620
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.