STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3705Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (219 aa)    
Predicted Functional Partners:
CC_3537
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.804
CC_1930
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 
 
 0.780
CC_1365
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 
 0.759
lptD
Conserved hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
   
 0.753
CC_3010
Identified by match to protein family HMM.
  
   
 0.752
CC_0931
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
 
 0.749
CC_2102
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.743
CC_3538
Helicase, UvrD/Rep family; Identified by match to protein family HMM; Belongs to the helicase family. UvrD subfamily.
 
     0.732
CC_3319
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0335 family.
  
     0.727
CC_1876
N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520.
    
 
 0.712
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.