STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3741Conserved hypothetical protein; Identified by Glimmer2; putative. (234 aa)    
Predicted Functional Partners:
CC_3739
Smr family protein; Identified by match to protein family HMM.
 
     0.844
CC_3740
Transglycosylase, putative; Similar to SP:P46885 PID:882708 PID:974447 GB:U00096 PID:1789179; identified by sequence similarity; putative.
       0.810
CC_3292
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.771
secB
Protein-export protein SecB, putative; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
 
     0.754
CC_2102
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.743
CC_3537
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.728
CC_0493
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.727
yidC
60 kd inner-membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
     0.712
CC_3319
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0335 family.
  
     0.690
recO
Conserved hypothetical protein; Involved in DNA repair and RecF pathway recombination.
  
     0.673
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.