STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3744Conserved hypothetical protein; Identified by Glimmer2; putative. (169 aa)    
Predicted Functional Partners:
CC_1511
Peptidoglycan binding domain protein; Identified by match to protein family HMM.
      
 0.759
cenR
DNA-binding response regulator; Identified by match to protein family HMM.
 
     0.641
CC_2936
Identified by match to PFAM protein family HMM PF00877.
 
   
 0.484
CC_3113
Mandelate racemase/muconate lactonizing enzyme family protein; Identified by match to PFAM protein family HMM PF01188.
 
     0.481
bacA
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.424
CC_3247
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.405
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.