STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_3757Hypothetical protein; Identified by Glimmer2; putative. (85 aa)    
Predicted Functional Partners:
mnmE
Thiophene and furan oxidation protein ThdF; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
       0.810
CC_0699
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.646
CC_0791
Trp repressor binding protein; Identified by match to protein family HMM.
   
  
 0.646
CC_2038
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.620
mnmG
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.568
CC_3758
Carboxymethylenebutenolidase; Identified by match to PFAM protein family HMM PF01738.
       0.554
CC_3759
Quinone oxidoreductase; Identified by match to protein family HMM.
  
    0.548
parA
Chromosome partitioning protein ParA; Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication (By similarity).
     
 0.539
flbE
flbE protein; Similar to GB:M98855 SP:Q04953 PID:144249; identified by sequence similarity; putative.
  
     0.534
CC_3750
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.533
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.