STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OII65976.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (382 aa)    
Predicted Functional Partners:
OII60382.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.999
OII60383.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OII63406.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.999
OII64951.1
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
BJP40_18850
Haloacid dehalogenase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.973
BJP40_14380
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.903
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.878
OII63364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.847
OII62983.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.763
OII61976.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.762
Your Current Organism:
Streptomyces sp. CC53
NCBI taxonomy Id: 1906740
Other names: S. sp. CC53
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