STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OII65242.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)    
Predicted Functional Partners:
OII65241.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
OII63403.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.538
OII60418.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.521
BJP40_00945
Serine/threonine protein kinase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.504
OII65530.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
BJP40_18040
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
OII60489.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.431
OII63083.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.425
OII63406.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.417
Your Current Organism:
Streptomyces sp. CC53
NCBI taxonomy Id: 1906740
Other names: S. sp. CC53
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.