STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOX99033.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (294 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.723
AOX99030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
AOX99031.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
AOX99032.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
AOX99027.1
Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
AOX99028.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
AOX99034.1
Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.506
AOY00638.1
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.438
AOY02033.1
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
   
    0.438
Your Current Organism:
Jeongeupia sp. USM3
NCBI taxonomy Id: 1906741
Other names: J. sp. USM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.