STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOY01890.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
AOY02398.1
Undecaprenyl-phosphate glucose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.908
AOY01887.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.827
AOY01886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.803
AOY01891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.803
AOY01888.1
EpsI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AOY01889.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
AOY02399.1
Chain length determinant protein EpsF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.752
AOY01982.1
Chloramphenicol acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.738
AOY01885.1
Polysaccharide export protein EpsE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.722
AOY01884.1
Peptidyl-prolyl cis-trans isomerase, EpsD family; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.689
Your Current Organism:
Jeongeupia sp. USM3
NCBI taxonomy Id: 1906741
Other names: J. sp. USM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.