STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOX44949.1RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
AOX44950.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.847
AOX44825.1
RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.798
AOX44944.1
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.716
AOX44496.1
Ribosome silencing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.654
AOX44952.1
Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.652
AOX44951.1
50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.636
AOX44948.1
Glutamate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.613
AOX45389.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.597
AOX45444.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.594
AOX45470.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.594
Your Current Organism:
Microbacterium sp. BH333
NCBI taxonomy Id: 1906742
Other names: M. sp. BH-3-3-3, Microbacterium sp. BH-3-3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.