STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR96311.1Hypothetical protein; Belongs to the proline racemase family. (333 aa)    
Predicted Functional Partners:
AIR96315.1
Oxidoreductase.
 
   
 0.969
AIR96312.1
Dihydrodipicolinate synthase; Belongs to the DapA family.
 
  
 0.965
AIR96313.1
Putative oxidoreductase.
 
     0.963
AIR96314.1
Hypothetical protein.
 
     0.959
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.919
AIS00689.1
Proline dehydrogenase.
    
 0.912
AIS01572.1
D-amino acid oxidase.
    
 0.908
AIR96310.1
gntR-family regulatory protein.
 
   
 0.845
AIR97684.1
Putative fatty aldehyde dehydrogenase.
 
 
 
 0.727
AIR96316.1
Peptidase M9A collagenase domain-containing protein.
       0.586
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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