STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR96359.1Nitrate ABC transporter, permease. (315 aa)    
Predicted Functional Partners:
AIR96360.1
ABC transporter substrate-binding protein.
 
  
 0.982
AIR96358.1
Phosphonate C-P lyase system protein PhnK.
 
  
 0.974
AIR96357.1
Oxidoreductase.
 
    0.969
AIR96361.1
Hypothetical protein.
 
     0.963
AIR96362.1
GntR family transcriptional regulator.
 
    0.897
AIR96742.1
Putative ABC transporter ATP-binding protein.
 
  
 0.890
AIR96651.1
ABC transporter ATP-binding protein.
 
  
 0.854
AIS01184.1
ABC transporter ATP-binding protein.
 
  
 0.850
AIR96650.1
ABC-type sulfate transporter periplasmic binding protein.
 
  
 0.762
AIS01185.1
Aliphatic sulfonates family ABC transporter, substrate-binding protein.
 
  
 0.753
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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