STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR96462.1Hypothetical protein. (459 aa)    
Predicted Functional Partners:
AIR96463.1
Hypothetical protein.
 
  
 0.970
AIR96461.1
S15 family peptidase.
 
    0.918
AIR96464.1
ABC transporter ATPase/permease.
 
     0.906
AIR96465.1
ABC transporter ATPase/permease.
 
    0.904
AIR96460.1
Hypothetical protein.
       0.872
AIR96454.1
Hypothetical protein.
 
     0.871
AIR96459.1
Hypothetical protein.
       0.757
AIR96455.1
ABC-type Fe3+-siderophore transporter substrate-binding protein.
 
     0.717
AIR96458.1
ABC-type Fe3+-siderophore transporter ATP-binding protein.
       0.700
AIR96457.1
Iron ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.675
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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