STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR96564.1Serine/threonine protein kinase. (544 aa)    
Predicted Functional Partners:
AIR99397.1
Protein phosphatase.
 
 
 0.825
AIR96492.1
Protein serine/threonine phosphatase.
 
 
 0.824
AIR96563.1
Threonine dehydratase.
       0.752
AIR97129.1
Hypothetical protein.
 
 
 
 0.745
AIR98082.1
Serine/threonine protein kinase.
  
   
 0.632
AIR98252.1
Hypothetical protein.
  
     0.586
AIR96567.1
Putative regulatory protein, melanin type secondary metabolite synthesis protein.
       0.551
AIS01165.1
Hypothetical protein.
 
 
 
 0.505
AIR98438.1
Magnesium or manganese-dependent protein phosphatase.
 
   0.494
AIS00891.1
Two-component system sensor kinase.
  
 
 0.487
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.