STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR96591.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
AIR96592.1
Hypothetical protein.
       0.741
AIS01674.1
Transcriptional regulator LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.686
AIR96444.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.639
gpr
L-glyceraldehyde 3-phosphate reductase.
       0.612
AIS01364.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.482
gltB
Glutamate synthase [NADPH] large chain.
  
  
 0.461
AIS00891.1
Two-component system sensor kinase.
   
  
 0.442
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.