STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR96641.1ABC amino acid transporter. (326 aa)    
Predicted Functional Partners:
AIR96642.1
L-cystine import ATP-binding protein.
 
 
 0.964
AIR96643.1
Ectoine/hydroxyectoine ABC transporter, permease.
 
 
 0.947
AIR97557.1
Amino acid ABC transporter, permease.
 
 
 0.923
AIR96645.1
ABC transporter permease.
 
     0.919
gluC
Glutamate transport system permease protein GluC.
 
 
 0.899
AIR96646.1
SsuD family monooxygenase.
 
    0.880
AIS00485.1
Arginine/ornithine transport permease.
 
 
 0.853
AIR96644.1
ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
    
0.852
AIS00484.1
L-cystine import ATP-binding protein.
 
 
 0.787
AIR96640.1
NAD(P)H-dependent FMN reductase.
 
    0.734
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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