close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR96680.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (406 aa)    
Predicted Functional Partners:
AIR98950.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.971
AIR99713.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
     
 0.933
AIR99481.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 
0.929
AIS00293.1
Penicillin-binding protein.
   
 
 0.913
AIS00125.1
D-alanyl-D-alanine carboxypeptidase.
  
  
 
0.906
AIR96581.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family.
  
     0.461
AIR96528.1
RNA polymerase sigma factor, sigma-F family; Belongs to the sigma-70 factor family.
  
     0.457
AIR99266.1
RNA polymerase sigma factor, sigma-F family; Belongs to the sigma-70 factor family.
  
     0.452
AIS00463.1
RNA polymerase sigma-F factor; Belongs to the sigma-70 factor family.
  
     0.447
AIR99265.1
RNA polymerase sigma factor, sigma-F family; Belongs to the sigma-70 factor family.
  
     0.443
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.