STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR96696.1Galactosidase. (526 aa)    
Predicted Functional Partners:
AIR96698.1
Substrate-binding transport.
 
     0.785
AIR96697.1
Beta-galactosidase.
 
  
 0.764
AIR96701.1
HTH-type transcriptional regulator.
 
     0.723
abnA
Arabinan endo-1,5-alpha-L-arabinosidase.
 
  
 0.701
AIR96699.1
ABC transporter permease.
 
    0.700
AIR96700.1
ABC transporter permease.
 
     0.671
AIR99169.1
Putative bifunctional pectate lyase/pectinesterase.
  
   
 0.649
xlnC
Endo-1,4-beta-xylanase C; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.646
AIR97118.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.645
AIR96715.1
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
  
  
 0.611
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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