STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR96951.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
AIR96949.1
Hypothetical protein.
 
     0.968
AIR96945.1
Hypothetical protein; Belongs to the P-Pant transferase superfamily.
 
     0.943
AIR96950.1
Hypothetical protein.
       0.872
AIR96948.1
Putative 2-nitropropane dioxygenase.
 
     0.858
AIR96943.1
Hypothetical protein.
 
     0.857
AIR96947.1
Putative hydrolase.
 
    0.848
AIR96946.1
Hypothetical protein.
       0.782
AIR96634.1
alpha-L-glutamate ligase.
 
     0.763
AIR96942.1
Putative adenylation protein.
 
     0.665
paaB
phenylacetate-CoA oxygenase subunit PaaB.
  
 
 0.644
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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