Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR96993.1 | AIR96994.1 | SGLAU_04835 | SGLAU_04840 | Ligase. | CobB/CobQ domain-containing protein glutamine amidotransferase. | 0.999 |
AIR96993.1 | AIR96996.1 | SGLAU_04835 | SGLAU_04850 | Ligase. | Copper resistance D. | 0.659 |
AIR96993.1 | AIR96997.1 | SGLAU_04835 | SGLAU_04855 | Ligase. | Putative membrane protein. | 0.626 |
AIR96993.1 | def2 | SGLAU_04835 | SGLAU_04830 | Ligase. | Peptide deformylase 2; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.785 |
AIR96993.1 | murE | SGLAU_04835 | SGLAU_09495 | Ligase. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.408 |
AIR96993.1 | murG | SGLAU_04835 | SGLAU_09470 | Ligase. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.953 |
AIR96993.1 | pfkA3 | SGLAU_04835 | SGLAU_04845 | Ligase. | 6-phosphofructokinase 3; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.538 |
AIR96994.1 | AIR96993.1 | SGLAU_04840 | SGLAU_04835 | CobB/CobQ domain-containing protein glutamine amidotransferase. | Ligase. | 0.999 |
AIR96994.1 | AIR96996.1 | SGLAU_04840 | SGLAU_04850 | CobB/CobQ domain-containing protein glutamine amidotransferase. | Copper resistance D. | 0.666 |
AIR96994.1 | AIR96997.1 | SGLAU_04840 | SGLAU_04855 | CobB/CobQ domain-containing protein glutamine amidotransferase. | Putative membrane protein. | 0.629 |
AIR96994.1 | AIS00545.1 | SGLAU_04840 | SGLAU_22980 | CobB/CobQ domain-containing protein glutamine amidotransferase. | Hypothetical protein. | 0.401 |
AIR96994.1 | def2 | SGLAU_04840 | SGLAU_04830 | CobB/CobQ domain-containing protein glutamine amidotransferase. | Peptide deformylase 2; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.754 |
AIR96994.1 | murE | SGLAU_04840 | SGLAU_09495 | CobB/CobQ domain-containing protein glutamine amidotransferase. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.898 |
AIR96994.1 | murG | SGLAU_04840 | SGLAU_09470 | CobB/CobQ domain-containing protein glutamine amidotransferase. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.903 |
AIR96994.1 | pfkA3 | SGLAU_04840 | SGLAU_04845 | CobB/CobQ domain-containing protein glutamine amidotransferase. | 6-phosphofructokinase 3; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.522 |
AIR96996.1 | AIR96993.1 | SGLAU_04850 | SGLAU_04835 | Copper resistance D. | Ligase. | 0.659 |
AIR96996.1 | AIR96994.1 | SGLAU_04850 | SGLAU_04840 | Copper resistance D. | CobB/CobQ domain-containing protein glutamine amidotransferase. | 0.666 |
AIR96996.1 | AIR96997.1 | SGLAU_04850 | SGLAU_04855 | Copper resistance D. | Putative membrane protein. | 0.736 |
AIR96996.1 | def2 | SGLAU_04850 | SGLAU_04830 | Copper resistance D. | Peptide deformylase 2; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.633 |
AIR96996.1 | pfkA3 | SGLAU_04850 | SGLAU_04845 | Copper resistance D. | 6-phosphofructokinase 3; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.568 |
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