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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR97548.1Secreted lipase. (288 aa)    
Predicted Functional Partners:
AIR97550.1
DNA polymerase subunit III; Belongs to the DNA polymerase type-C family. DnaE2 subfamily.
       0.737
AIR97551.1
Membrane protein.
       0.682
AIR97549.1
Hypothetical protein.
  
    0.546
AIS01958.1
TetR family transcriptional regulator.
  
     0.509
AIR97766.1
Hypothetical protein.
  
     0.503
AIR98881.1
Regulatory protein, MerR.
  
    0.448
AIR98108.1
Hypothetical protein.
  
     0.437
AIR97531.1
Lipase 1.
  
   
 0.429
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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