Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR97180.1 | AIR97927.1 | SGLAU_05785 | SGLAU_09585 | Hypothetical protein. | Transcriptional regulator. | 0.602 |
AIR97924.1 | AIR97927.1 | SGLAU_09570 | SGLAU_09585 | Hypothetical protein. | Transcriptional regulator. | 0.671 |
AIR97924.1 | AIR97928.1 | SGLAU_09570 | SGLAU_09590 | Hypothetical protein. | Ferredoxin reductase. | 0.643 |
AIR97924.1 | AIR97930.1 | SGLAU_09570 | SGLAU_09600 | Hypothetical protein. | Glycine oxidase. | 0.613 |
AIR97924.1 | AIR97931.1 | SGLAU_09570 | SGLAU_09605 | Hypothetical protein. | Hypothetical protein. | 0.613 |
AIR97924.1 | metF | SGLAU_09570 | SGLAU_09575 | Hypothetical protein. | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.805 |
AIR97924.1 | nfo | SGLAU_09570 | SGLAU_09620 | Hypothetical protein. | Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.513 |
AIR97924.1 | thiE | SGLAU_09570 | SGLAU_09580 | Hypothetical protein. | Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.723 |
AIR97924.1 | thiG | SGLAU_09570 | SGLAU_09610 | Hypothetical protein. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.613 |
AIR97927.1 | AIR97180.1 | SGLAU_09585 | SGLAU_05785 | Transcriptional regulator. | Hypothetical protein. | 0.602 |
AIR97927.1 | AIR97924.1 | SGLAU_09585 | SGLAU_09570 | Transcriptional regulator. | Hypothetical protein. | 0.671 |
AIR97927.1 | AIR97928.1 | SGLAU_09585 | SGLAU_09590 | Transcriptional regulator. | Ferredoxin reductase. | 0.780 |
AIR97927.1 | AIR97929.1 | SGLAU_09585 | SGLAU_09595 | Transcriptional regulator. | Hypothetical protein. | 0.702 |
AIR97927.1 | AIR97930.1 | SGLAU_09585 | SGLAU_09600 | Transcriptional regulator. | Glycine oxidase. | 0.667 |
AIR97927.1 | AIR97931.1 | SGLAU_09585 | SGLAU_09605 | Transcriptional regulator. | Hypothetical protein. | 0.667 |
AIR97927.1 | metF | SGLAU_09585 | SGLAU_09575 | Transcriptional regulator. | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.699 |
AIR97927.1 | nfo | SGLAU_09585 | SGLAU_09620 | Transcriptional regulator. | Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.626 |
AIR97927.1 | thiE | SGLAU_09585 | SGLAU_09580 | Transcriptional regulator. | Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.770 |
AIR97927.1 | thiG | SGLAU_09585 | SGLAU_09610 | Transcriptional regulator. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.667 |
AIR97928.1 | AIR97924.1 | SGLAU_09590 | SGLAU_09570 | Ferredoxin reductase. | Hypothetical protein. | 0.643 |
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