Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AIR98563.1Sensory box/GGDEF family protein. (704 aa)    
Predicted Functional Partners:
AIS00891.1
Two-component system sensor kinase.
  
 
 0.992
AIR96121.1
Magnesium or manganese-dependent protein phosphatase.
 
 
 0.978
AIS00683.1
Integral membrane phosphodiesterase.
 
 
0.953
AIR97142.1
Hypothetical protein.
 
 
 0.938
AIS01110.1
PAS/PAC sensor hybrid histidine kinase precursor.
  
 
 0.841
AIS00206.1
Hypothetical protein.
 
 
0.719
AIR99078.1
Hypothetical protein.
 
 
0.716
AIS01115.1
GAF domain-containing protein.
  
 
 0.708
AIS00438.1
Hypothetical protein.
 
   
 0.692
whiG
RNA polymerase sigma factor WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.644
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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