STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR99183.1Pit accessory protein. (206 aa)    
Predicted Functional Partners:
pit
Putative low-affinity inorganic phosphate transporter.
 
  
 0.993
AIR97655.1
Putative low-affinity inorganic phosphate transporter.
 
  
 0.953
AIR99182.1
Hypothetical protein.
     
 0.839
AIS00703.1
Hypothetical protein.
      
 0.463
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
    0.461
rpmB
Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.444
rpmB-2
Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.444
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
    0.421
AIR96181.1
Putative thiopeptide-lantipeptide biosynthesis related protein.
   
    0.410
AIR99912.1
ABC transporter membrane protein.
      
 0.405
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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