STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR99274.1Glycosyl transferase family protein. (707 aa)    
Predicted Functional Partners:
AIR99275.1
Glycosyl transferase.
 
  
 0.954
AIR99276.1
Sensor histidine kinase TcrS.
 
    0.886
AIR99277.1
Putative transcriptional regulatory protein.
 
     0.884
AIR99532.1
Glycosyl transferase family 2.
 
  
 0.808
AIR99278.1
Hypothetical protein.
       0.746
AIR99272.1
TetR family transcriptional regulator.
       0.725
AIR99273.1
Major facilitator efflux protein.
       0.654
AIR98517.1
Secreted protein.
 
     0.492
AIR98149.1
Hypothetical protein.
  
  
 0.456
AIR98679.1
Integral membrane protein.
  
  
 0.429
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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