Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR99734.1 | AIR99736.1 | SGLAU_18870 | SGLAU_18880 | ArsR-family transcriptional regulator. | L-allo-threonine aldolase. | 0.551 |
AIR99734.1 | AIR99737.1 | SGLAU_18870 | SGLAU_18885 | ArsR-family transcriptional regulator. | Hypothetical protein. | 0.551 |
AIR99734.1 | AIR99742.1 | SGLAU_18870 | SGLAU_18910 | ArsR-family transcriptional regulator. | Hypothetical protein. | 0.422 |
AIR99734.1 | coaX | SGLAU_18870 | SGLAU_18905 | ArsR-family transcriptional regulator. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.551 |
AIR99734.1 | nadB | SGLAU_18870 | SGLAU_18895 | ArsR-family transcriptional regulator. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.499 |
AIR99734.1 | nadC | SGLAU_18870 | SGLAU_18900 | ArsR-family transcriptional regulator. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.551 |
AIR99734.1 | panC | SGLAU_18870 | SGLAU_18890 | ArsR-family transcriptional regulator. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.570 |
AIR99736.1 | AIR99734.1 | SGLAU_18880 | SGLAU_18870 | L-allo-threonine aldolase. | ArsR-family transcriptional regulator. | 0.551 |
AIR99736.1 | AIR99737.1 | SGLAU_18880 | SGLAU_18885 | L-allo-threonine aldolase. | Hypothetical protein. | 0.765 |
AIR99736.1 | AIR99742.1 | SGLAU_18880 | SGLAU_18910 | L-allo-threonine aldolase. | Hypothetical protein. | 0.687 |
AIR99736.1 | AIR99743.1 | SGLAU_18880 | SGLAU_18915 | L-allo-threonine aldolase. | Hypothetical protein. | 0.662 |
AIR99736.1 | AIR99744.1 | SGLAU_18880 | SGLAU_18920 | L-allo-threonine aldolase. | Hypothetical protein. | 0.551 |
AIR99736.1 | coaX | SGLAU_18880 | SGLAU_18905 | L-allo-threonine aldolase. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.751 |
AIR99736.1 | gltB | SGLAU_18880 | SGLAU_09180 | L-allo-threonine aldolase. | Glutamate synthase [NADPH] large chain. | 0.572 |
AIR99736.1 | nadB | SGLAU_18880 | SGLAU_18895 | L-allo-threonine aldolase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.765 |
AIR99736.1 | nadC | SGLAU_18880 | SGLAU_18900 | L-allo-threonine aldolase. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.765 |
AIR99736.1 | panC | SGLAU_18880 | SGLAU_18890 | L-allo-threonine aldolase. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.765 |
AIR99737.1 | AIR99734.1 | SGLAU_18885 | SGLAU_18870 | Hypothetical protein. | ArsR-family transcriptional regulator. | 0.551 |
AIR99737.1 | AIR99736.1 | SGLAU_18885 | SGLAU_18880 | Hypothetical protein. | L-allo-threonine aldolase. | 0.765 |
AIR99737.1 | AIR99742.1 | SGLAU_18885 | SGLAU_18910 | Hypothetical protein. | Hypothetical protein. | 0.754 |
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