STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR99909.1Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. (336 aa)    
Predicted Functional Partners:
uppS1
Isoprenyl transferase 1; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.976
AIR96184.1
Putative Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.969
crtB
Putative Phytoene synthase.
  
 0.942
AIR99559.1
Polyprenyl synthetase.
  
  
0.923
AIR96340.1
Putative geranylgeranyl pyrophosphase synthase.
  
  
0.922
AIS00471.1
Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.922
AIS01594.1
Putative (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.921
AIS01591.1
Putative phytoene synthase.
  
 0.881
AIS01158.1
Putative germacradienol/geosmin synthase.
     
 0.819
AIS00442.1
Putative epi-isozizaene synthase.
     
 0.808
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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