STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR99910.1Membrane protein. (404 aa)    
Predicted Functional Partners:
AIR99912.1
ABC transporter membrane protein.
 
     0.955
AIR99911.1
ABC transporter ATP-binding protein.
 
     0.947
AIR98125.1
Cell wall hydrolase/autolysin.
    
   0.836
AIR99909.1
Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 0.759
AIR96166.1
Putative thiopeptide-lantipeptide biosynthesis related protein.
   
 
 0.729
AIR97033.1
ABC transporter permease.
   
 
 0.729
AIR97753.1
Peptide ABC transporter permease.
   
 
 0.729
AIR98820.1
ABC transport system integral membrane protein.
   
 
 0.729
AIR98471.1
Integral membrane protein.
 
     0.714
AIS00891.1
Two-component system sensor kinase.
   
 
 0.559
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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