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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR99912.1ABC transporter membrane protein. (294 aa)    
Predicted Functional Partners:
AIR99911.1
ABC transporter ATP-binding protein.
 
 
 0.978
AIR99910.1
Membrane protein.
 
     0.955
AIR99909.1
Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.697
AIR98472.1
ABC transporter ATP-binding protein.
 
 
 0.658
AIR97041.1
ABC transporter.
 
 
 0.581
AIS00579.1
ABC transporter integral membrane protein.
 
 
 0.579
AIS00581.1
ABC transporter transmembrane protein.
 
 
 0.534
AIS00580.1
Nodulation ABC transporter NodI.
 
 
 0.488
AIS00582.1
Nodulation ABC transporter NodI.
 
 
 0.477
AIR96587.1
ABC transporter ATP-binding protein.
  
 
 0.469
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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