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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS00288.1Integral membrane protein. (775 aa)    
Predicted Functional Partners:
AIS00290.1
PadR family transcriptional regulator.
 
   
 0.978
AIS00289.1
Lipoprotein releasing system, ATP-binding protein.
 
  
 0.958
AIS00291.1
Hypothetical protein.
       0.770
AIS00292.1
Hypothetical protein.
       0.598
AIR96619.1
Hypothetical protein.
  
     0.536
AIR98446.1
Hypothetical protein.
  
     0.508
AIS00226.1
Hypothetical protein.
  
     0.470
AIR96858.1
Transcriptional regulator.
  
     0.456
AIR98982.1
Calcium binding protein.
  
     0.437
AIS00293.1
Penicillin-binding protein.
     
 0.437
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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