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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS00289.1Lipoprotein releasing system, ATP-binding protein. (229 aa)    
Predicted Functional Partners:
AIS00288.1
Integral membrane protein.
 
  
 0.958
AIS00290.1
PadR family transcriptional regulator.
 
     0.923
AIS00291.1
Hypothetical protein.
       0.770
AIS02343.1
ABC transporter permease.
 
 
 0.734
AIR98820.1
ABC transport system integral membrane protein.
 
 
 0.633
AIR97033.1
ABC transporter permease.
 
 
 0.624
AIS00292.1
Hypothetical protein.
     
 0.603
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   
 0.574
AIR96166.1
Putative thiopeptide-lantipeptide biosynthesis related protein.
  
 
 0.567
AIR97753.1
Peptide ABC transporter permease.
  
 
 0.567
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
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