STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS00519.1Two-component system sensor kinase. (421 aa)    
Predicted Functional Partners:
AIS00891.1
Two-component system sensor kinase.
   
 
 0.953
cseB
Transcriptional regulatory protein CseB.
 
 
 0.909
AIR96121.1
Magnesium or manganese-dependent protein phosphatase.
  
 
 0.904
AIS00520.1
Lipoprotein.
       0.811
AIS01650.1
Putative two-component system response regulator.
  
   0.753
afsQ1
Transcriptional regulatory protein AfsQ1.
  
   0.743
AIS00590.1
Two-component system response regulator.
  
   0.737
AIR98552.1
Phosphate regulon transcriptional regulatory protein PhoB.
  
   0.722
regX3
Sensory transduction protein regX3.
  
   0.720
AIS00918.1
Two-component system regulator.
  
   0.717
Your Current Organism:
Streptomyces glaucescens
NCBI taxonomy Id: 1907
Other names: ATCC 19761, ATCC 23622, Actinomyces glaucescens, BCRC 11478, CBS 499.68, CCRC 11478, CCRC:11478, CECT 3133, DSM 40155, IFO 12774, IMET 43584, INA 8731, ISP 5155, JCM 4377, LMG 19330, LMG:19330, NBRC 12774, NCIMB 9619, NCIMB 9844, NRRL B-2706, NRRL-ISP 5155, S. glaucescens, UNIQEM 147, VKM Ac-617
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.