Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR99437.1 | AIS00681.1 | SGLAU_17370 | SGLAU_23660 | Putative 3-carboxy-cis,cis-muconate cycloisomerase. | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.735 |
AIR99787.1 | AIS00681.1 | SGLAU_19150 | SGLAU_23660 | Putative hydrolase. | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.648 |
AIR99787.1 | serA | SGLAU_19150 | SGLAU_23690 | Putative hydrolase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.510 |
AIR99787.1 | serC | SGLAU_19150 | SGLAU_15160 | Putative hydrolase. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.670 |
AIS00680.1 | AIS00681.1 | SGLAU_23655 | SGLAU_23660 | Oxidoreductase. | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.686 |
AIS00680.1 | AIS00683.1 | SGLAU_23655 | SGLAU_23670 | Oxidoreductase. | Integral membrane phosphodiesterase. | 0.551 |
AIS00680.1 | ilvB | SGLAU_23655 | SGLAU_23675 | Oxidoreductase. | Acetolactate synthase. | 0.560 |
AIS00681.1 | AIR99437.1 | SGLAU_23660 | SGLAU_17370 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative 3-carboxy-cis,cis-muconate cycloisomerase. | 0.735 |
AIS00681.1 | AIR99787.1 | SGLAU_23660 | SGLAU_19150 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative hydrolase. | 0.648 |
AIS00681.1 | AIS00680.1 | SGLAU_23660 | SGLAU_23655 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Oxidoreductase. | 0.686 |
AIS00681.1 | AIS00683.1 | SGLAU_23660 | SGLAU_23670 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Integral membrane phosphodiesterase. | 0.551 |
AIS00681.1 | ilvB | SGLAU_23660 | SGLAU_23675 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Acetolactate synthase. | 0.603 |
AIS00681.1 | ilvC | SGLAU_23660 | SGLAU_23685 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.710 |
AIS00681.1 | ilvH | SGLAU_23660 | SGLAU_23680 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Acetolactate synthase small subunit. | 0.692 |
AIS00681.1 | rplF | SGLAU_23660 | SGLAU_20205 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.579 |
AIS00681.1 | serA | SGLAU_23660 | SGLAU_23690 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.611 |
AIS00681.1 | serC | SGLAU_23660 | SGLAU_15160 | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.845 |
AIS00683.1 | AIS00680.1 | SGLAU_23670 | SGLAU_23655 | Integral membrane phosphodiesterase. | Oxidoreductase. | 0.551 |
AIS00683.1 | AIS00681.1 | SGLAU_23670 | SGLAU_23660 | Integral membrane phosphodiesterase. | Dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.551 |
AIS00683.1 | ilvB | SGLAU_23670 | SGLAU_23675 | Integral membrane phosphodiesterase. | Acetolactate synthase. | 0.728 |
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