Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR97664.1 | AIS00908.1 | SGLAU_08260 | SGLAU_24850 | Permease. | Hypothetical protein. | 0.465 |
AIS00903.1 | AIS00907.1 | SGLAU_24825 | SGLAU_24845 | AraC family transcription regulator. | Hypothetical protein. | 0.551 |
AIS00903.1 | AIS00908.1 | SGLAU_24825 | SGLAU_24850 | AraC family transcription regulator. | Hypothetical protein. | 0.465 |
AIS00907.1 | AIS00903.1 | SGLAU_24845 | SGLAU_24825 | Hypothetical protein. | AraC family transcription regulator. | 0.551 |
AIS00907.1 | AIS00908.1 | SGLAU_24845 | SGLAU_24850 | Hypothetical protein. | Hypothetical protein. | 0.739 |
AIS00907.1 | recA | SGLAU_24845 | SGLAU_24855 | Hypothetical protein. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.651 |
AIS00907.1 | recX | SGLAU_24845 | SGLAU_24860 | Hypothetical protein. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.651 |
AIS00908.1 | AIR97664.1 | SGLAU_24850 | SGLAU_08260 | Hypothetical protein. | Permease. | 0.465 |
AIS00908.1 | AIS00903.1 | SGLAU_24850 | SGLAU_24825 | Hypothetical protein. | AraC family transcription regulator. | 0.465 |
AIS00908.1 | AIS00907.1 | SGLAU_24850 | SGLAU_24845 | Hypothetical protein. | Hypothetical protein. | 0.739 |
AIS00908.1 | recA | SGLAU_24850 | SGLAU_24855 | Hypothetical protein. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.709 |
AIS00908.1 | recX | SGLAU_24850 | SGLAU_24860 | Hypothetical protein. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.709 |
recA | AIS00907.1 | SGLAU_24855 | SGLAU_24845 | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Hypothetical protein. | 0.651 |
recA | AIS00908.1 | SGLAU_24855 | SGLAU_24850 | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Hypothetical protein. | 0.709 |
recA | recX | SGLAU_24855 | SGLAU_24860 | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.996 |
recX | AIS00907.1 | SGLAU_24860 | SGLAU_24845 | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | Hypothetical protein. | 0.651 |
recX | AIS00908.1 | SGLAU_24860 | SGLAU_24850 | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | Hypothetical protein. | 0.709 |
recX | recA | SGLAU_24860 | SGLAU_24855 | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.996 |